SPOTCLUST Complex Families  [Please cite]

This section contains the identified spoligotyping families. Please click here to learn about how a SpolDB3-based model was initialized and here to learn about how Randomly initialized model was seeded.

Family N1,     Family N2,     Family N3,     Family N4,     Family N5,     Family N6,     Family N7,     Family N8,     Family N9,     Family N10,     Family N11,     Family N12,     Family N13,     Family N14,     Family N15,     Family N16,     Family N17,     Family N18,     Family N19,     Family N20,     Family N21,     Family N22,     Family N23,     Family N24,     Family N25,     Family N26,     Family N27,     Family N28,     Family N29,     Family N30,     Family N31,     Family N32,     Family N33,     Family N34,     Family N35,     Family N36,     Family N37,     Family N38,     Family N39,     Family N40,     Family N41,     Family N42,     Family N43,    
Family N44,     Family N45,     Family N46,     Family N47,     Family N48,    

Family N32

This is a Sequence Logo of Family N32 spoligotypes.
S indicates present spacer, N indicates absent spacer. For more information on sequence logos, 
please click the link at the bottom of this page. Stability = 0.57

NY State NumberNumber of occurrencesProbabilityBinary formatOctal formatLabel given by SpolDB3 modelCountry of origin
NY_S00259 18 1.00 0000000000000000000000001111110100001111111 000000007720771 Family36 USA
NY_S01197 2 1.00 0000000000000000000000001111110100001110111 000000007720731 Family36 USA
NY_S00418 19 1.00 0000000000000000000000001111111100001111111 000000007760771 Family36 USA
NY_S00502 2 1.00 1100000000000000000000000001111100001110111 600000000760731 Family36 USA
NY_S00067 4 1.00 1100110000000000000100001111111100001111111 630000207760771 T3 USA
NY_S01110 3 1.00 1111100000000000000000001111111100001111111 760000007760771 T3 USA
NY_S00712 2 0.94 1111110000000000000000000111111100001111111 770000003760771 T3 USA

         The Sequence Logo was created using