Clade

Clade

Clade

AFRI

H

PINI

AFRI_1

H1

PINI1

AFRI_2

H2

PINI2

AFRI_3

H3

S

Beijing

H3-Ural-1

T

BOV

H37Rv

T1-RUS2

BOV_1

H4-Ural-2

T2

BOV_2

LAM

T2-Uganda

BOV_3

LAM1

T3

BOV_4-Caprae

LAM11-ZWE

T3-ETH

Cameroon

LAM12-Madrid1

T3-OSA

Canetti

LAM2

T4

CAS

LAM3

T4-CEU1

CAS1-Delhi

LAM4

T5

CAS1-Kili

LAM5

T5-Madrid2

CAS2

LAM6

T5-RUS1

EAI

LAM8

T-Tuscany

EAI1-SOM

Manu_ancestor

Turkey

EAI2-Manila

Manu1

X1

EAI2-Nonthaburi

Manu2

X2

EAI3-IND

Manu3

X3

EAI4-VNM

Microti

ZERO

EAI6-BGD1

 

 

EAI7-BGD2

 

 

EAI8-MGD